SubtiBank SubtiBank
yvkC [2018-02-11T10:37:47.000Z]
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yvkC [2018-02-11T10:37:47.000Z]

similar to pyruvate water dikinase
locus
BSU35190
pI
4.62
mw
94.25 kDa
protein length
831 aa Sequence Blast
gene length
2493 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,615,793 → 3,618,288

    The protein

    Paralogous protein(s)

  • [protein|BF0329D469211F579F5CF0CBB58A6D96DD8CB839|Pps]

    • Structure

  • [PDB|5FBU](rifampin phosphotransferase from Listeria monocytogenes, 34% identity) [pubmed|27103605]

    • Expression and Regulation

    Operons

    genes
    [gene|7235F9D0048961BBD93FA6A4322018029A607435|yvkC]-[gene|672EAC84789910ADB2C2A449910BEECA39A9A2B1|yvkB]-[gene|F4028F82CCF1A0335D1ABF823645A36D9072F17F|yvkA]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A341 (yvkC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/341 NBRP B. subtilis, Japan]
  • BKE35190 (Δ[gene|7235F9D0048961BBD93FA6A4322018029A607435|yvkC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTTGAAACCCCTCTTT, downstream forward: _UP4_TGATGCGTCCCCCTCTTTCT
  • BKK35190 (Δ[gene|7235F9D0048961BBD93FA6A4322018029A607435|yvkC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35190 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTTGAAACCCCTCTTT, downstream forward: _UP4_TGATGCGTCCCCCTCTTTCT

    • References

    Research papers

  • 27103605